Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 AIRN-201ENST00000601203 4374 ntBASIC18.46■□□□□ 0.55
LRRC58Q96CX6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 AC069236.1-201ENST00000604339 616 ntBASIC18.46■□□□□ 0.55
LRRC58Q96CX6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC58Q96CX6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
LRRC58Q96CX6 AC079598.2-202ENST00000546624 1451 ntBASIC18.46■□□□□ 0.54
LRRC58Q96CX6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.46■□□□□ 0.54
LRRC58Q96CX6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 AL031598.1-201ENST00000561511 1773 ntBASIC18.45■□□□□ 0.54
LRRC58Q96CX6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 AC092666.2-201ENST00000613287 246 ntBASIC18.45■□□□□ 0.54
LRRC58Q96CX6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC58Q96CX6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 AC135050.7-201ENST00000624508 2218 ntBASIC18.44■□□□□ 0.54
LRRC58Q96CX6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 WIZP1-201ENST00000531444 2299 ntBASIC18.44■□□□□ 0.54
LRRC58Q96CX6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC58Q96CX6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LRRC58Q96CX6 AL390961.4-201ENST00000623958 2535 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms