Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ZNF428Q96B54 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZNF428Q96B54 AL135905.2-201ENST00000584934 1404 ntBASIC25.01■■□□□ 1.59
ZNF428Q96B54 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.01■■□□□ 1.59
ZNF428Q96B54 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ZNF428Q96B54 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
ZNF428Q96B54 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.01■■□□□ 1.59
ZNF428Q96B54 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25■■□□□ 1.59
ZNF428Q96B54 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25■■□□□ 1.59
ZNF428Q96B54 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
ZNF428Q96B54 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25■■□□□ 1.59
ZNF428Q96B54 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 ZNF815P-204ENST00000434898 1737 ntBASIC25■■□□□ 1.59
ZNF428Q96B54 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ZNF428Q96B54 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
ZNF428Q96B54 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
ZNF428Q96B54 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ZNF428Q96B54 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
ZNF428Q96B54 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
ZNF428Q96B54 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC24.99■■□□□ 1.59
ZNF428Q96B54 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.99■■□□□ 1.59
ZNF428Q96B54 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
ZNF428Q96B54 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC24.99■■□□□ 1.59
ZNF428Q96B54 AP001412.1-201ENST00000608405 714 ntBASIC24.99■■□□□ 1.59
ZNF428Q96B54 AL353708.3-201ENST00000610272 989 ntBASIC24.99■■□□□ 1.59
ZNF428Q96B54 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
ZNF428Q96B54 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ZNF428Q96B54 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZNF428Q96B54 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZNF428Q96B54 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ZNF428Q96B54 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZNF428Q96B54 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 AL355355.2-201ENST00000442321 338 ntBASIC24.98■■□□□ 1.59
ZNF428Q96B54 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZNF428Q96B54 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZNF428Q96B54 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 CR392000.1-201ENST00000624770 1228 ntBASIC24.98■■□□□ 1.59
ZNF428Q96B54 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
ZNF428Q96B54 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.98■■□□□ 1.59
ZNF428Q96B54 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 AL390955.1-201ENST00000428694 934 ntBASIC24.97■■□□□ 1.59
ZNF428Q96B54 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
ZNF428Q96B54 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ZNF428Q96B54 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZNF428Q96B54 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ZNF428Q96B54 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZNF428Q96B54 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.96■■□□□ 1.59
ZNF428Q96B54 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZNF428Q96B54 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZNF428Q96B54 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ZNF428Q96B54 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms