Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.91■■□□□ 1.58
SMARCC1Q92922 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SMARCC1Q92922 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SMARCC1Q92922 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.91■■□□□ 1.58
SMARCC1Q92922 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
SMARCC1Q92922 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 LINC01311-201ENST00000565162 1445 ntBASIC24.9■■□□□ 1.58
SMARCC1Q92922 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 GCSHP2-201ENST00000560971 527 ntBASIC24.9■■□□□ 1.58
SMARCC1Q92922 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SMARCC1Q92922 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
SMARCC1Q92922 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.89■■□□□ 1.58
SMARCC1Q92922 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC1Q92922 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC1Q92922 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC24.89■■□□□ 1.58
SMARCC1Q92922 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC1Q92922 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC24.89■■□□□ 1.58
SMARCC1Q92922 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC24.89■■□□□ 1.58
SMARCC1Q92922 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC1Q92922 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC1Q92922 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC24.89■■□□□ 1.58
SMARCC1Q92922 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC24.89■■□□□ 1.58
SMARCC1Q92922 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC24.89■■□□□ 1.58
SMARCC1Q92922 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SMARCC1Q92922 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
SMARCC1Q92922 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
SMARCC1Q92922 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SMARCC1Q92922 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMARCC1Q92922 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMARCC1Q92922 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC24.88■■□□□ 1.57
SMARCC1Q92922 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.87■■□□□ 1.57
SMARCC1Q92922 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.87■■□□□ 1.57
SMARCC1Q92922 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
SMARCC1Q92922 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SMARCC1Q92922 KRT8P11-201ENST00000409686 1436 ntBASIC24.86■■□□□ 1.57
SMARCC1Q92922 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC1Q92922 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC1Q92922 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC1Q92922 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC1Q92922 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC24.86■■□□□ 1.57
SMARCC1Q92922 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC1Q92922 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC1Q92922 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMARCC1Q92922 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC24.85■■□□□ 1.57
SMARCC1Q92922 FEM1AP1-201ENST00000431297 1995 ntBASIC24.85■■□□□ 1.57
SMARCC1Q92922 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SMARCC1Q92922 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.85■■□□□ 1.57
SMARCC1Q92922 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMARCC1Q92922 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.85■■□□□ 1.57
SMARCC1Q92922 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.85■■□□□ 1.57
SMARCC1Q92922 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SMARCC1Q92922 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.85■■□□□ 1.57
SMARCC1Q92922 BCL10-202ENST00000620248 774 ntTSL 5 BASIC24.85■■□□□ 1.57
SMARCC1Q92922 AC012313.10-201ENST00000623509 926 ntBASIC24.85■■□□□ 1.57
SMARCC1Q92922 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms