Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 CD99P1-205ENST00000527459 561 ntBASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 KRT18P6-201ENST00000555540 1265 ntBASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 AP001271.2-201ENST00000624018 1556 ntBASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 CROCCP3-202ENST00000420820 1947 ntBASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40AQ8WXH6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 AC090340.1-201ENST00000620778 4980 ntBASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 LSM12P1-201ENST00000411836 588 ntBASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 AC098934.4-201ENST00000564127 592 ntBASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40AQ8WXH6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms