Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AC099336.1-202ENST00000602961 463 ntBASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 Z83836.1-201ENST00000624605 1642 ntBASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 AC116407.2-201ENST00000613639 860 ntBASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC7.92□□□□□ -1.14
SYNE2Q8WXH0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 PRSS29P-201ENST00000440800 595 ntBASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 AL356652.1-201ENST00000615962 565 ntBASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
SYNE2Q8WXH0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 MIR662-201ENST00000384847 95 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 YBX1P5-201ENST00000509441 847 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 AC023632.3-201ENST00000521633 145 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 HLA-DRB6-201ENST00000411500 1235 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 AP002414.1-201ENST00000391405 1147 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 NME6-203ENST00000415644 849 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 RPS2P32-201ENST00000439199 892 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 AC003101.2-201ENST00000612557 442 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 Z92544.3-201ENST00000624747 417 ntBASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC7.9□□□□□ -1.14
SYNE2Q8WXH0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SYNE2Q8WXH0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
SYNE2Q8WXH0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC7.9□□□□□ -1.15
SYNE2Q8WXH0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms