Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
U2AF1L4Q8WU68 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 AP006587.1-201ENST00000534129 1502 ntBASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
U2AF1L4Q8WU68 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.2■■□□□ 1.15
U2AF1L4Q8WU68 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
U2AF1L4Q8WU68 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 HOMER2P1-201ENST00000455653 964 ntBASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 AC116407.4-201ENST00000623319 1061 ntBASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 MIR2861-201ENST00000636310 90 ntBASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 AC005332.1-201ENST00000577698 1310 ntBASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
U2AF1L4Q8WU68 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 AL671277.2-201ENST00000458060 996 ntBASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 AC010653.2-201ENST00000623505 997 ntBASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
U2AF1L4Q8WU68 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 PTBP1P-201ENST00000554374 1601 ntBASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 AC069148.1-201ENST00000608741 768 ntBASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
U2AF1L4Q8WU68 AC073314.1-201ENST00000568729 2216 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms