Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 RNF126P1-202ENST00000569893 925 ntBASIC17.61■□□□□ 0.41
CHD6Q8TD26 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 AC005034.1-201ENST00000426657 489 ntBASIC17.61■□□□□ 0.41
CHD6Q8TD26 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.61■□□□□ 0.41
CHD6Q8TD26 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHD6Q8TD26 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.6■□□□□ 0.41
CHD6Q8TD26 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 AF228730.6-201ENST00000641497 218 ntBASIC17.6■□□□□ 0.41
CHD6Q8TD26 AC084121.3-201ENST00000641716 218 ntBASIC17.6■□□□□ 0.41
CHD6Q8TD26 AC105233.6-201ENST00000642093 218 ntBASIC17.6■□□□□ 0.41
CHD6Q8TD26 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 AC233702.3-201ENST00000578656 1387 ntBASIC17.6■□□□□ 0.41
CHD6Q8TD26 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 PAWRP1-201ENST00000451083 565 ntBASIC17.6■□□□□ 0.41
CHD6Q8TD26 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHD6Q8TD26 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.6■□□□□ 0.41
CHD6Q8TD26 RPS2P1-201ENST00000434010 821 ntBASIC17.59■□□□□ 0.41
CHD6Q8TD26 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD6Q8TD26 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD6Q8TD26 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD6Q8TD26 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD6Q8TD26 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD6Q8TD26 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD6Q8TD26 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.59■□□□□ 0.41
CHD6Q8TD26 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.59■□□□□ 0.41
CHD6Q8TD26 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CHD6Q8TD26 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHD6Q8TD26 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHD6Q8TD26 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHD6Q8TD26 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 DUX4L17-201ENST00000557360 1267 ntBASIC17.58■□□□□ 0.41
CHD6Q8TD26 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 AC063926.2-201ENST00000623766 1308 ntBASIC17.58■□□□□ 0.41
CHD6Q8TD26 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CHD6Q8TD26 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.58■□□□□ 0.4
CHD6Q8TD26 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHD6Q8TD26 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.58■□□□□ 0.4
CHD6Q8TD26 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.58■□□□□ 0.4
CHD6Q8TD26 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.58■□□□□ 0.4
CHD6Q8TD26 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.58■□□□□ 0.4
CHD6Q8TD26 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.58■□□□□ 0.4
CHD6Q8TD26 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHD6Q8TD26 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CHD6Q8TD26 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.57■□□□□ 0.4
CHD6Q8TD26 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD6Q8TD26 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.57■□□□□ 0.4
CHD6Q8TD26 BCRP1-201ENST00000444246 691 ntBASIC17.57■□□□□ 0.4
CHD6Q8TD26 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.57■□□□□ 0.4
CHD6Q8TD26 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHD6Q8TD26 AC011467.4-201ENST00000594891 528 ntBASIC17.57■□□□□ 0.4
CHD6Q8TD26 HLA-A-209ENST00000638375 975 ntBASIC17.57■□□□□ 0.4
CHD6Q8TD26 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHD6Q8TD26 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHD6Q8TD26 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.57■□□□□ 0.4
CHD6Q8TD26 GK-202ENST00000378941 458 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms