Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 AC005082.1-201ENST00000413042 2259 ntBASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 AC092666.2-201ENST00000613287 246 ntBASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 AC100791.3-201ENST00000617619 330 ntBASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 AL161938.1-201ENST00000569833 2180 ntBASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RAB3IL1Q8TBN0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.69
RAB3IL1Q8TBN0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 KRT19P1-201ENST00000405746 1186 ntBASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 UBE2DNL-204ENST00000602536 740 ntBASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 MIR6821-201ENST00000617625 74 ntBASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 MYCNOS-205ENST00000641950 531 ntBASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3IL1Q8TBN0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 TERF1P5-201ENST00000477545 1207 ntBASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 AC087623.3-201ENST00000607047 1098 ntBASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3IL1Q8TBN0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3IL1Q8TBN0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms