Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
UBA3Q8TBC4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.58■□□□□ 0.89
UBA3Q8TBC4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
UBA3Q8TBC4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBA3Q8TBC4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBA3Q8TBC4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBA3Q8TBC4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBA3Q8TBC4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBA3Q8TBC4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 AC007952.6-201ENST00000573168 2673 ntBASIC20.57■□□□□ 0.88
UBA3Q8TBC4 AC003957.1-201ENST00000625108 2673 ntBASIC20.57■□□□□ 0.88
UBA3Q8TBC4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBA3Q8TBC4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 RARRES2P10-201ENST00000564312 460 ntBASIC20.56■□□□□ 0.88
UBA3Q8TBC4 Z99916.2-201ENST00000604037 246 ntBASIC20.56■□□□□ 0.88
UBA3Q8TBC4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
UBA3Q8TBC4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 RPS2P4-201ENST00000476944 856 ntBASIC20.55■□□□□ 0.88
UBA3Q8TBC4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.55■□□□□ 0.88
UBA3Q8TBC4 HLA-A-209ENST00000638375 975 ntBASIC20.55■□□□□ 0.88
UBA3Q8TBC4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms