Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 AC087289.5-201ENST00000586076 3175 ntBASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 AC133681.1-201ENST00000465482 601 ntBASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 AC110285.5-201ENST00000611501 352 ntBASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
SMARCC2Q8TAQ2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 AP000974.1-201ENST00000623909 2387 ntBASIC22.74■■□□□ 1.23
SMARCC2Q8TAQ2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.73■■□□□ 1.23
SMARCC2Q8TAQ2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SMARCC2Q8TAQ2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SMARCC2Q8TAQ2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms