Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NUP43Q8NFH3 ZNF815P-204ENST00000434898 1737 ntBASIC18.18■□□□□ 0.5
NUP43Q8NFH3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NUP43Q8NFH3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NUP43Q8NFH3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.15■□□□□ 0.5
NUP43Q8NFH3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
NUP43Q8NFH3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NUP43Q8NFH3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.14■□□□□ 0.5
NUP43Q8NFH3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NUP43Q8NFH3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.14■□□□□ 0.49
NUP43Q8NFH3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NUP43Q8NFH3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms