Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 PTBP1P-201ENST00000554374 1601 ntBASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF248Q8NDW4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 AC026396.1-201ENST00000419388 421 ntBASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 PCED1CP-201ENST00000419887 785 ntBASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 AP000692.2-201ENST00000608391 879 ntBASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF248Q8NDW4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 AL450487.1-201ENST00000426799 995 ntBASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 IER3-202ENST00000376377 1350 ntBASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF248Q8NDW4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 AC130371.2-201ENST00000619443 611 ntBASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 AC010653.2-201ENST00000623505 997 ntBASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF248Q8NDW4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ZNF248Q8NDW4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF248Q8NDW4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ZNF248Q8NDW4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms