Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22■■□□□ 1.11
RETREG2Q8NC44 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC22■■□□□ 1.11
RETREG2Q8NC44 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22■■□□□ 1.11
RETREG2Q8NC44 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22■■□□□ 1.11
RETREG2Q8NC44 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22■■□□□ 1.11
RETREG2Q8NC44 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RETREG2Q8NC44 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22■■□□□ 1.11
RETREG2Q8NC44 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22■■□□□ 1.11
RETREG2Q8NC44 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22■■□□□ 1.11
RETREG2Q8NC44 KSR1P1-201ENST00000446298 240 ntBASIC22■■□□□ 1.11
RETREG2Q8NC44 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RETREG2Q8NC44 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RETREG2Q8NC44 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22■■□□□ 1.11
RETREG2Q8NC44 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RETREG2Q8NC44 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RETREG2Q8NC44 KRT18P22-201ENST00000402024 1347 ntBASIC22■■□□□ 1.11
RETREG2Q8NC44 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22■■□□□ 1.11
RETREG2Q8NC44 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22■■□□□ 1.11
RETREG2Q8NC44 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RETREG2Q8NC44 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.99■■□□□ 1.11
RETREG2Q8NC44 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 AC113347.1-201ENST00000413321 391 ntBASIC21.98■■□□□ 1.11
RETREG2Q8NC44 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
RETREG2Q8NC44 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 AL137013.1-201ENST00000432946 1228 ntBASIC21.97■■□□□ 1.11
RETREG2Q8NC44 AC116562.2-201ENST00000507042 360 ntBASIC21.97■■□□□ 1.11
RETREG2Q8NC44 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RETREG2Q8NC44 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 NIFKP9-201ENST00000419265 221 ntBASIC21.96■■□□□ 1.11
RETREG2Q8NC44 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 FITM1-202ENST00000559294 800 ntBASIC21.96■■□□□ 1.11
RETREG2Q8NC44 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 AC125437.2-201ENST00000625180 2167 ntBASIC21.96■■□□□ 1.11
RETREG2Q8NC44 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 KRT16P1-201ENST00000399124 1418 ntBASIC21.96■■□□□ 1.11
RETREG2Q8NC44 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
RETREG2Q8NC44 TMEM179-206ENST00000616017 1645 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms