Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC01555Q8NAE3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 Z85996.1-201ENST00000494644 937 ntBASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 AL160286.2-201ENST00000567150 934 ntBASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 AC026471.5-201ENST00000615068 467 ntBASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 Z82202.1-201ENST00000623446 1880 ntBASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC01555Q8NAE3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 NUDT16P1-203ENST00000513809 620 ntBASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 AC131212.4-201ENST00000623606 975 ntBASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 AL031985.4-201ENST00000642138 673 ntBASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC01555Q8NAE3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 MESTP1-201ENST00000404287 994 ntBASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 AC026271.3-201ENST00000571884 352 ntBASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 SDHAP1-207ENST00000440850 2000 ntBASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LINC01555Q8NAE3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms