Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TTC39CQ8N584 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TTC39CQ8N584 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.67■□□□□ 0.9
TTC39CQ8N584 AC026271.3-201ENST00000571884 352 ntBASIC20.67■□□□□ 0.9
TTC39CQ8N584 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TTC39CQ8N584 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 KRT16P1-201ENST00000399124 1418 ntBASIC20.67■□□□□ 0.9
TTC39CQ8N584 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TTC39CQ8N584 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.67■□□□□ 0.9
TTC39CQ8N584 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TTC39CQ8N584 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39CQ8N584 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39CQ8N584 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39CQ8N584 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39CQ8N584 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
TTC39CQ8N584 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39CQ8N584 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39CQ8N584 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TTC39CQ8N584 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 AC104417.2-201ENST00000562989 1793 ntBASIC20.65■□□□□ 0.9
TTC39CQ8N584 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.65■□□□□ 0.9
TTC39CQ8N584 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TTC39CQ8N584 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TTC39CQ8N584 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.65■□□□□ 0.9
TTC39CQ8N584 AC008550.1-201ENST00000511500 884 ntBASIC20.65■□□□□ 0.9
TTC39CQ8N584 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.65■□□□□ 0.9
TTC39CQ8N584 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TTC39CQ8N584 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.65■□□□□ 0.9
TTC39CQ8N584 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TTC39CQ8N584 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TTC39CQ8N584 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.64■□□□□ 0.9
TTC39CQ8N584 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.64■□□□□ 0.9
TTC39CQ8N584 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TTC39CQ8N584 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.64■□□□□ 0.89
TTC39CQ8N584 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.64■□□□□ 0.89
TTC39CQ8N584 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.64■□□□□ 0.89
TTC39CQ8N584 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.64■□□□□ 0.89
TTC39CQ8N584 AL031985.4-201ENST00000642138 673 ntBASIC20.64■□□□□ 0.89
TTC39CQ8N584 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TTC39CQ8N584 AL158211.5-201ENST00000623583 2518 ntBASIC20.64■□□□□ 0.89
TTC39CQ8N584 AIRN-201ENST00000601203 4374 ntBASIC20.64■□□□□ 0.89
TTC39CQ8N584 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.64■□□□□ 0.89
TTC39CQ8N584 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.64■□□□□ 0.89
TTC39CQ8N584 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC39CQ8N584 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TTC39CQ8N584 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms