Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HIST3H2BBQ8N257 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 AC022211.2-201ENST00000585075 2527 ntBASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST3H2BBQ8N257 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HIST3H2BBQ8N257 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 AC009237.14-201ENST00000609975 1594 ntBASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HIST3H2BBQ8N257 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST3H2BBQ8N257 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.52□□□□□ -0.09
HIST3H2BBQ8N257 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HIST3H2BBQ8N257 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HIST3H2BBQ8N257 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms