Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 YBX1P10-201ENST00000444752 975 ntBASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 AP003097.1-201ENST00000530657 1135 ntBASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.21■□□□□ 0.67
CPNE9Q8IYJ1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CPNE9Q8IYJ1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPNE9Q8IYJ1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 AL032819.2-201ENST00000624543 2162 ntBASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 AIRN-201ENST00000601203 4374 ntBASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPNE9Q8IYJ1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CPNE9Q8IYJ1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPNE9Q8IYJ1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms