Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.14■□□□□ 0.17
ZNF546Q86UE3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 AL356441.2-201ENST00000443009 864 ntBASIC16.13■□□□□ 0.17
ZNF546Q86UE3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF546Q86UE3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF546Q86UE3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 AC245052.3-201ENST00000450182 901 ntBASIC16.11■□□□□ 0.17
ZNF546Q86UE3 EEF1DP3-203ENST00000566025 782 ntBASIC16.11■□□□□ 0.17
ZNF546Q86UE3 MIR4767-201ENST00000582827 78 ntBASIC16.11■□□□□ 0.17
ZNF546Q86UE3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.11■□□□□ 0.17
ZNF546Q86UE3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ZNF546Q86UE3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms