Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 NXF1-207ENST00000530875 1922 ntTSL 1 (best)25.63■■□□□ 1.699e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-214ENST00000593066 590 ntTSL 525.53■■□□□ 1.689e-7■□□□□ 8.3
PABPN1Q86U42 CCDC14-210ENST00000438440 783 ntTSL 324.53■■□□□ 1.529e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-211ENST00000590940 762 ntTSL 323.83■■□□□ 1.419e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-215ENST00000593095 636 ntTSL 323.79■■□□□ 1.49e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-205ENST00000587993 555 ntTSL 323.48■■□□□ 1.359e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-203ENST00000587168 352 ntTSL 422.4■■□□□ 1.189e-7■□□□□ 8.3
PABPN1Q86U42 TNPO2-215ENST00000589572 586 ntTSL 322.34■■□□□ 1.179e-7■□□□□ 8.3
PABPN1Q86U42 RTKN-210ENST00000492013 853 ntTSL 222.09■■□□□ 1.139e-7■□□□□ 8.3
PABPN1Q86U42 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.19e-7■□□□□ 8.3
PABPN1Q86U42 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.069e-7■□□□□ 8.3
PABPN1Q86U42 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.889e-7■□□□□ 8.3
PABPN1Q86U42 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.869e-7■□□□□ 8.3
PABPN1Q86U42 PIEZO1-211ENST00000495568 901 ntTSL 220.34■□□□□ 0.859e-7■□□□□ 8.3
PABPN1Q86U42 EIF3G-204ENST00000587681 537 ntTSL 218.28■□□□□ 0.529e-7■□□□□ 8.3
PABPN1Q86U42 CCDC14-208ENST00000434954 567 ntAPPRIS ALT2 TSL 412.22□□□□□ -0.459e-7■□□□□ 8.3
PABPN1Q86U42 CCDC14-206ENST00000426152 735 ntAPPRIS ALT2 TSL 310.45□□□□□ -0.749e-7■□□□□ 8.3
PABPN1Q86U42 GCKR-202ENST00000411584 789 ntTSL 314.91□□□□□ -0.029e-9■□□□□ 8.3
PABPN1Q86U42 GCKR-206ENST00000478147 579 ntTSL 513.59□□□□□ -0.239e-9■□□□□ 8.3
PABPN1Q86U42 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.982e-12■□□□□ 8.3
PABPN1Q86U42 WDR59-221ENST00000569968 393 ntTSL 216.73■□□□□ 0.273e-7■□□□□ 8.2
PABPN1Q86U42 APOA2-208ENST00000481413 927 ntTSL 231.5■■■□□ 2.637e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-204ENST00000464492 530 ntTSL 3 BASIC30.02■■■□□ 2.47e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-209ENST00000481511 655 ntTSL 526.06■■□□□ 1.767e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-206ENST00000469730 265 ntTSL 522.66■■□□□ 1.227e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-203ENST00000463812 401 ntTSL 2 BASIC19.26■□□□□ 0.677e-10■□□□□ 8.2
PABPN1Q86U42 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.627e-10■□□□□ 8.2
PABPN1Q86U42 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC18.9■□□□□ 0.627e-10■□□□□ 8.2
PABPN1Q86U42 APOM-202ENST00000375918 922 ntTSL 2 BASIC18.45■□□□□ 0.547e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-202ENST00000463273 469 ntTSL 1 (best)18.27■□□□□ 0.527e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.847e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-207ENST00000470459 416 ntTSL 5 BASIC8.26□□□□□ -1.097e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC7.72□□□□□ -1.177e-10■□□□□ 8.2
PABPN1Q86U42 APOA2-205ENST00000468465 421 ntTSL 2 BASIC6.49□□□□□ -1.377e-10■□□□□ 8.2
PABPN1Q86U42 MAZ-216ENST00000616501 991 ntTSL 5 BASIC42.47■■■■■ 4.396e-11■□□□□ 8.2
PABPN1Q86U42 MAZ-207ENST00000563012 646 ntTSL 340.79■■■■■ 4.126e-11■□□□□ 8.2
PABPN1Q86U42 SRRT-205ENST00000449389 448 ntTSL 322.26■■□□□ 1.156e-11■□□□□ 8.2
PABPN1Q86U42 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC32.53■■■□□ 2.86e-7■□□□□ 8.2
PABPN1Q86U42 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC26.72■■□□□ 1.876e-7■□□□□ 8.2
PABPN1Q86U42 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.656e-7■□□□□ 8.2
PABPN1Q86U42 WDR59-210ENST00000563797 652 ntTSL 316.27■□□□□ 0.27e-7■□□□□ 8.2
PABPN1Q86U42 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 339.85■■■■□ 3.972e-8■□□□□ 8.2
PABPN1Q86U42 TAF15-206ENST00000603967 656 ntTSL 335.28■■■■□ 3.242e-8■□□□□ 8.2
PABPN1Q86U42 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC33.83■■■■□ 3.012e-8■□□□□ 8.2
PABPN1Q86U42 SRSF4-208ENST00000634348 8128 ntTSL 515.19■□□□□ 0.022e-8■□□□□ 8.2
PABPN1Q86U42 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC46.66■■■■■ 5.067e-7■□□□□ 8.1
PABPN1Q86U42 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC46.66■■■■■ 5.067e-7■□□□□ 8.1
PABPN1Q86U42 DDAH2-217ENST00000469963 1682 ntTSL 538.33■■■■□ 3.737e-7■□□□□ 8.1
PABPN1Q86U42 DDAH2-218ENST00000480913 937 ntTSL 538.24■■■■□ 3.717e-7■□□□□ 8.1
PABPN1Q86U42 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC37.55■■■■□ 3.67e-7■□□□□ 8.1
PABPN1Q86U42 RANBP3-223ENST00000591736 573 ntTSL 437.16■■■■□ 3.547e-7■□□□□ 8.1
PABPN1Q86U42 DDAH2-219ENST00000483792 898 ntTSL 525.66■■□□□ 1.77e-7■□□□□ 8.1
PABPN1Q86U42 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.77e-7■□□□□ 8.1
PABPN1Q86U42 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.627e-7■□□□□ 8.1
PABPN1Q86U42 DDAH2-216ENST00000437288 724 ntTSL 524.98■■□□□ 1.597e-7■□□□□ 8.1
PABPN1Q86U42 FLNB-206ENST00000468939 573 ntTSL 224.05■■□□□ 1.442e-23■□□□□ 8.1
PABPN1Q86U42 RANBP3-230ENST00000593025 551 ntTSL 423.99■■□□□ 1.437e-7■□□□□ 8.1
PABPN1Q86U42 DDX5-218ENST00000581693 2156 ntTSL 519.57■□□□□ 0.727e-7■□□□□ 8.1
PABPN1Q86U42 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC19.48■□□□□ 0.717e-7■□□□□ 8.1
PABPN1Q86U42 DDX5-203ENST00000540698 2225 ntTSL 518.86■□□□□ 0.617e-7■□□□□ 8.1
PABPN1Q86U42 AC005077.4-201ENST00000421546 3495 ntBASIC16.53■□□□□ 0.245e-11■□□□□ 8.1
PABPN1Q86U42 RANBP3-218ENST00000590623 786 ntTSL 514.85□□□□□ -0.037e-7■□□□□ 8.1
PABPN1Q86U42 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC10.94□□□□□ -0.661e-8■□□□□ 8.1
PABPN1Q86U42 DDX5-215ENST00000581230 3558 ntTSL 210.92□□□□□ -0.667e-7■□□□□ 8.1
PABPN1Q86U42 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.761e-8■□□□□ 8.1
PABPN1Q86U42 RBM39-239ENST00000494274 704 ntTSL 314.58□□□□□ -0.081e-74■□□□□ 8.1
PABPN1Q86U42 PTMS-203ENST00000538057 976 ntTSL 243.03■■■■■ 4.481e-9■□□□□ 8.1
PABPN1Q86U42 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC43.03■■■■■ 4.481e-9■□□□□ 8.1
PABPN1Q86U42 PTMS-205ENST00000540828 644 ntTSL 1 (best)42.76■■■■■ 4.441e-9■□□□□ 8.1
PABPN1Q86U42 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.691e-9■□□□□ 8.1
PABPN1Q86U42 PTMS-204ENST00000540667 820 ntTSL 230.56■■■□□ 2.481e-9■□□□□ 8.1
PABPN1Q86U42 NSUN2-208ENST00000513888 1290 ntTSL 231.97■■■□□ 2.711e-9■□□□□ 8.1
PABPN1Q86U42 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.531e-9■□□□□ 8.1
PABPN1Q86U42 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.691e-9■□□□□ 8.1
PABPN1Q86U42 NSUN2-203ENST00000504374 3217 ntTSL 225.46■■□□□ 1.671e-9■□□□□ 8.1
PABPN1Q86U42 NSUN2-209ENST00000514127 614 ntTSL 315.2■□□□□ 0.021e-9■□□□□ 8.1
PABPN1Q86U42 NSUN2-205ENST00000505892 3558 ntTSL 1 (best)13.58□□□□□ -0.231e-9■□□□□ 8.1
PABPN1Q86U42 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC51.68■■■■■ 5.862e-6■□□□□ 8.1
PABPN1Q86U42 C19orf48-207ENST00000596655 1639 ntTSL 237.15■■■■□ 3.542e-6■□□□□ 8.1
PABPN1Q86U42 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.492e-6■□□□□ 8.1
PABPN1Q86U42 STARD10-212ENST00000538437 747 ntTSL 236.23■■■■□ 3.392e-6■□□□□ 8.1
PABPN1Q86U42 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.372e-6■□□□□ 8.1
PABPN1Q86U42 STARD10-217ENST00000543089 506 ntTSL 1 (best)34.46■■■■□ 3.112e-6■□□□□ 8.1
PABPN1Q86U42 RBM3-204ENST00000466764 1375 ntTSL 332.83■■■□□ 2.852e-6■□□□□ 8.1
PABPN1Q86U42 STARD10-204ENST00000535075 526 ntTSL 232.31■■■□□ 2.762e-6■□□□□ 8.1
PABPN1Q86U42 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC32.12■■■□□ 2.732e-6■□□□□ 8.1
PABPN1Q86U42 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.712e-6■□□□□ 8.1
PABPN1Q86U42 RBM3-205ENST00000472897 501 ntTSL 530.37■■■□□ 2.452e-6■□□□□ 8.1
PABPN1Q86U42 RBM3-208ENST00000489344 724 ntTSL 230.19■■■□□ 2.422e-6■□□□□ 8.1
PABPN1Q86U42 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.162e-6■□□□□ 8.1
PABPN1Q86U42 C19orf48-216ENST00000641834 1718 nt27.7■■■□□ 2.032e-6■□□□□ 8.1
PABPN1Q86U42 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.762e-6■□□□□ 8.1
PABPN1Q86U42 KMT2B-203ENST00000586308 705 ntTSL 225.54■■□□□ 1.682e-6■□□□□ 8.1
PABPN1Q86U42 C19orf48-210ENST00000598463 1844 ntTSL 1 (best)24.21■■□□□ 1.472e-6■□□□□ 8.1
PABPN1Q86U42 RBM3-209ENST00000490127 567 ntTSL 523.67■■□□□ 1.382e-6■□□□□ 8.1
PABPN1Q86U42 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC21.92■■□□□ 1.12e-6■□□□□ 8.1
PABPN1Q86U42 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.042e-6■□□□□ 8.1
PABPN1Q86U42 ZFP36L1-202ENST00000439696 3190 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.782e-6■□□□□ 8.1
PABPN1Q86U42 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC17.58■□□□□ 0.42e-6■□□□□ 8.1
PABPN1Q86U42 CP-208ENST00000474204 712 ntTSL 217.48■□□□□ 0.392e-6■□□□□ 8.1
Retrieved 100 of 8,254 protein–RNA pairs in 39 ms