Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
MRPL55Q7Z7F7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 AL390719.1-204ENST00000412397 1219 ntBASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 AC005332.7-201ENST00000614046 2005 ntBASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
MRPL55Q7Z7F7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 BX276092.2-201ENST00000417668 665 ntBASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 AC026185.1-201ENST00000445748 174 ntBASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
MRPL55Q7Z7F7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.47□□□□□ -0.41
MRPL55Q7Z7F7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms