Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 KRT18P68-201ENST00000392293 1000 ntBASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 AL031963.3-201ENST00000606441 850 ntBASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.86■□□□□ 0.45
PTCHD4Q6ZW05 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 AL355472.2-201ENST00000422958 438 ntBASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 KRT8P20-201ENST00000423953 1409 ntBASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 CYP2T3P-201ENST00000601990 817 ntBASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 AC007613.1-201ENST00000572811 2597 ntBASIC17.85■□□□□ 0.45
PTCHD4Q6ZW05 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 CROCCP3-202ENST00000420820 1947 ntBASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PTCHD4Q6ZW05 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PTCHD4Q6ZW05 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PTCHD4Q6ZW05 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTCHD4Q6ZW05 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PTCHD4Q6ZW05 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.83■□□□□ 0.45
PTCHD4Q6ZW05 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.83■□□□□ 0.45
PTCHD4Q6ZW05 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 AC069236.1-201ENST00000604339 616 ntBASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 AC231657.2-201ENST00000624556 255 ntBASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PTCHD4Q6ZW05 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 AC005082.1-201ENST00000413042 2259 ntBASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 AC007322.1-201ENST00000426983 750 ntBASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PTCHD4Q6ZW05 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms