Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 AC006557.6-201ENST00000623071 864 ntBASIC19.8■□□□□ 0.76
CASC4Q6P4E1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASC4Q6P4E1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 AL020996.1-203ENST00000536896 2307 ntBASIC19.79■□□□□ 0.76
CASC4Q6P4E1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.79■□□□□ 0.76
CASC4Q6P4E1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 AC092118.2-201ENST00000613495 667 ntBASIC19.79■□□□□ 0.76
CASC4Q6P4E1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CASC4Q6P4E1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 TFP1-202ENST00000475455 1573 ntBASIC19.78■□□□□ 0.76
CASC4Q6P4E1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CASC4Q6P4E1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 AC124283.5-201ENST00000624661 1809 ntBASIC19.77■□□□□ 0.76
CASC4Q6P4E1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 AC091874.3-201ENST00000512672 1195 ntBASIC19.77■□□□□ 0.76
CASC4Q6P4E1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASC4Q6P4E1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CASC4Q6P4E1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CASC4Q6P4E1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CASC4Q6P4E1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CASC4Q6P4E1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 TNXA-203ENST00000507684 2038 ntBASIC19.76■□□□□ 0.75
CASC4Q6P4E1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 AC004408.2-201ENST00000623613 2777 ntBASIC19.76■□□□□ 0.75
CASC4Q6P4E1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASC4Q6P4E1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms