Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 AC012676.1-201ENST00000574705 1949 ntBASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 AC112907.2-201ENST00000448639 330 ntBASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 AL691432.3-201ENST00000621860 400 ntBASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.09■□□□□ 0.65
LYSMD4Q5XG99 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.08■□□□□ 0.65
LYSMD4Q5XG99 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 ZNF444P1-201ENST00000559497 298 ntBASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 NEK4P2-201ENST00000580004 1012 ntBASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYSMD4Q5XG99 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LYSMD4Q5XG99 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms