Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 HMGA1P5-201ENST00000412453 271 ntBASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 AK4P3-201ENST00000418260 669 ntBASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SHROOM1Q2M3G4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 TCF3P1-201ENST00000423021 1937 ntBASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 AC087388.1-201ENST00000571370 1112 ntBASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 AC116562.4-202ENST00000641738 218 ntBASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.69■■□□□ 1.22
SHROOM1Q2M3G4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SHROOM1Q2M3G4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 SLC25A1P2-201ENST00000430693 912 ntBASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 AC063952.2-201ENST00000498792 1227 ntBASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 AC022616.7-201ENST00000525383 220 ntBASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHROOM1Q2M3G4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 BX664615.1-201ENST00000443558 458 ntBASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 CKBP1-201ENST00000565489 1086 ntBASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.66■■□□□ 1.22
SHROOM1Q2M3G4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms