Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
OTUD4Q01804 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
OTUD4Q01804 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 YBX1P10-201ENST00000444752 975 ntBASIC20.05■□□□□ 0.8
OTUD4Q01804 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.05■□□□□ 0.8
OTUD4Q01804 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.05■□□□□ 0.8
OTUD4Q01804 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
OTUD4Q01804 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.05■□□□□ 0.8
OTUD4Q01804 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.05■□□□□ 0.8
OTUD4Q01804 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
OTUD4Q01804 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
OTUD4Q01804 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.05■□□□□ 0.8
OTUD4Q01804 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
OTUD4Q01804 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.05■□□□□ 0.8
OTUD4Q01804 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
OTUD4Q01804 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
OTUD4Q01804 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.04■□□□□ 0.8
OTUD4Q01804 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
OTUD4Q01804 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.04■□□□□ 0.8
OTUD4Q01804 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.04■□□□□ 0.8
OTUD4Q01804 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 AC142086.2-201ENST00000569753 217 ntBASIC20.04■□□□□ 0.8
OTUD4Q01804 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
OTUD4Q01804 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
OTUD4Q01804 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.04■□□□□ 0.8
OTUD4Q01804 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.04■□□□□ 0.8
OTUD4Q01804 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
OTUD4Q01804 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.03■□□□□ 0.8
OTUD4Q01804 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
OTUD4Q01804 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.03■□□□□ 0.8
OTUD4Q01804 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.03■□□□□ 0.8
OTUD4Q01804 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
OTUD4Q01804 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.03■□□□□ 0.8
OTUD4Q01804 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.03■□□□□ 0.8
OTUD4Q01804 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.03■□□□□ 0.8
OTUD4Q01804 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.03■□□□□ 0.8
OTUD4Q01804 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.03■□□□□ 0.8
OTUD4Q01804 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.03■□□□□ 0.8
OTUD4Q01804 AC093503.3-201ENST00000624917 2352 ntBASIC20.03■□□□□ 0.8
OTUD4Q01804 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.03■□□□□ 0.8
OTUD4Q01804 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.03■□□□□ 0.8
OTUD4Q01804 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
OTUD4Q01804 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
OTUD4Q01804 AL161938.1-201ENST00000569833 2180 ntBASIC20.02■□□□□ 0.8
OTUD4Q01804 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.02■□□□□ 0.8
OTUD4Q01804 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTUD4Q01804 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
OTUD4Q01804 AC141586.3-201ENST00000562166 1838 ntBASIC20.02■□□□□ 0.8
OTUD4Q01804 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.02■□□□□ 0.8
OTUD4Q01804 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
OTUD4Q01804 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.02■□□□□ 0.8
OTUD4Q01804 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.02■□□□□ 0.8
OTUD4Q01804 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
OTUD4Q01804 AC008687.6-201ENST00000596318 630 ntBASIC20.02■□□□□ 0.8
OTUD4Q01804 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.02■□□□□ 0.8
OTUD4Q01804 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
OTUD4Q01804 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
OTUD4Q01804 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
OTUD4Q01804 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.02■□□□□ 0.8
OTUD4Q01804 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.02■□□□□ 0.8
OTUD4Q01804 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms