Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VLDLRP98155 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VLDLRP98155 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 AC006333.2-201ENST00000607957 2099 ntBASIC18.11■□□□□ 0.49
VLDLRP98155 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.11■□□□□ 0.49
VLDLRP98155 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 AL355802.2-201ENST00000402069 882 ntBASIC18.11■□□□□ 0.49
VLDLRP98155 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.11■□□□□ 0.49
VLDLRP98155 DUX4L16-201ENST00000555130 1264 ntBASIC18.11■□□□□ 0.49
VLDLRP98155 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.11■□□□□ 0.49
VLDLRP98155 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 AC011767.1-201ENST00000617410 1153 ntBASIC18.11■□□□□ 0.49
VLDLRP98155 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 TEX21P-204ENST00000641479 1693 ntBASIC18.11■□□□□ 0.49
VLDLRP98155 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.11■□□□□ 0.49
VLDLRP98155 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VLDLRP98155 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VLDLRP98155 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.1■□□□□ 0.49
VLDLRP98155 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
VLDLRP98155 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.1■□□□□ 0.49
VLDLRP98155 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.1■□□□□ 0.49
VLDLRP98155 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
VLDLRP98155 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
VLDLRP98155 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
VLDLRP98155 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.1■□□□□ 0.49
VLDLRP98155 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.1■□□□□ 0.49
VLDLRP98155 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.1■□□□□ 0.49
VLDLRP98155 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 AC104581.1-202ENST00000635932 2618 ntBASIC18.1■□□□□ 0.49
VLDLRP98155 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.1■□□□□ 0.49
VLDLRP98155 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
VLDLRP98155 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.1■□□□□ 0.49
VLDLRP98155 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VLDLRP98155 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VLDLRP98155 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VLDLRP98155 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.09■□□□□ 0.49
VLDLRP98155 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
VLDLRP98155 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.09■□□□□ 0.49
VLDLRP98155 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.09■□□□□ 0.49
VLDLRP98155 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.09■□□□□ 0.49
VLDLRP98155 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.09■□□□□ 0.49
VLDLRP98155 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.09■□□□□ 0.49
VLDLRP98155 AC018553.1-201ENST00000616682 1458 ntBASIC18.09■□□□□ 0.49
VLDLRP98155 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.09■□□□□ 0.49
VLDLRP98155 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
VLDLRP98155 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 ABHD17AP1-201ENST00000358206 933 ntBASIC18.09■□□□□ 0.49
VLDLRP98155 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 C2orf69P4-201ENST00000565394 541 ntBASIC18.09■□□□□ 0.49
VLDLRP98155 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.09■□□□□ 0.49
VLDLRP98155 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.09■□□□□ 0.49
VLDLRP98155 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.09■□□□□ 0.49
VLDLRP98155 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 AC141586.3-201ENST00000562166 1838 ntBASIC18.09■□□□□ 0.49
VLDLRP98155 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VLDLRP98155 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms