Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
IRX4P78413 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IRX4P78413 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IRX4P78413 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IRX4P78413 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.16■□□□□ 0.82
IRX4P78413 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IRX4P78413 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IRX4P78413 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.15■□□□□ 0.82
IRX4P78413 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IRX4P78413 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IRX4P78413 AC116562.4-201ENST00000641316 2276 ntBASIC20.15■□□□□ 0.82
IRX4P78413 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IRX4P78413 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IRX4P78413 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.15■□□□□ 0.82
IRX4P78413 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
IRX4P78413 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
IRX4P78413 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IRX4P78413 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.15■□□□□ 0.82
IRX4P78413 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
IRX4P78413 CD177P1-201ENST00000606252 935 ntBASIC20.15■□□□□ 0.82
IRX4P78413 AL353708.3-201ENST00000610272 989 ntBASIC20.15■□□□□ 0.82
IRX4P78413 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.15■□□□□ 0.82
IRX4P78413 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
IRX4P78413 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
IRX4P78413 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IRX4P78413 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.15■□□□□ 0.82
IRX4P78413 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
IRX4P78413 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
IRX4P78413 AC125437.2-201ENST00000625180 2167 ntBASIC20.14■□□□□ 0.81
IRX4P78413 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.14■□□□□ 0.81
IRX4P78413 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.14■□□□□ 0.81
IRX4P78413 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.14■□□□□ 0.81
IRX4P78413 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.14■□□□□ 0.81
IRX4P78413 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.14■□□□□ 0.81
IRX4P78413 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
IRX4P78413 KRT18P35-201ENST00000510488 1269 ntBASIC20.14■□□□□ 0.81
IRX4P78413 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.14■□□□□ 0.81
IRX4P78413 RN7SL850P-201ENST00000579959 291 ntBASIC20.14■□□□□ 0.81
IRX4P78413 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.14■□□□□ 0.81
IRX4P78413 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.14■□□□□ 0.81
IRX4P78413 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
IRX4P78413 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
IRX4P78413 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
IRX4P78413 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
IRX4P78413 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IRX4P78413 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.13■□□□□ 0.81
IRX4P78413 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
IRX4P78413 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.13■□□□□ 0.81
IRX4P78413 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
IRX4P78413 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
IRX4P78413 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.13■□□□□ 0.81
IRX4P78413 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.13■□□□□ 0.81
IRX4P78413 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
IRX4P78413 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
IRX4P78413 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
IRX4P78413 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.13■□□□□ 0.81
IRX4P78413 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
IRX4P78413 AC120498.9-201ENST00000339021 3867 ntBASIC20.12■□□□□ 0.81
IRX4P78413 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 AC087633.2-202ENST00000565166 1439 ntBASIC20.12■□□□□ 0.81
IRX4P78413 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.12■□□□□ 0.81
IRX4P78413 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 ARMC10P1-201ENST00000313754 855 ntBASIC20.12■□□□□ 0.81
IRX4P78413 AL390719.1-204ENST00000412397 1219 ntBASIC20.12■□□□□ 0.81
IRX4P78413 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.12■□□□□ 0.81
IRX4P78413 AC026471.5-201ENST00000615068 467 ntBASIC20.12■□□□□ 0.81
IRX4P78413 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.12■□□□□ 0.81
IRX4P78413 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
IRX4P78413 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IRX4P78413 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms