Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ASIC1P78348 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 KRT18P16-201ENST00000510337 1294 ntBASIC21.66■■□□□ 1.06
ASIC1P78348 PRKY-204ENST00000533551 1019 ntBASIC21.66■■□□□ 1.06
ASIC1P78348 AC233263.1-201ENST00000578059 224 ntBASIC21.66■■□□□ 1.06
ASIC1P78348 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.66■■□□□ 1.06
ASIC1P78348 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.66■■□□□ 1.06
ASIC1P78348 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ASIC1P78348 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ASIC1P78348 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ASIC1P78348 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ASIC1P78348 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.66■■□□□ 1.06
ASIC1P78348 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.65■■□□□ 1.06
ASIC1P78348 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.65■■□□□ 1.06
ASIC1P78348 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ASIC1P78348 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
ASIC1P78348 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 AC120498.9-201ENST00000339021 3867 ntBASIC21.65■■□□□ 1.06
ASIC1P78348 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.65■■□□□ 1.06
ASIC1P78348 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 TUBB8P6-201ENST00000436895 1288 ntBASIC21.65■■□□□ 1.06
ASIC1P78348 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.65■■□□□ 1.06
ASIC1P78348 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
ASIC1P78348 AC069544.1-201ENST00000609399 999 ntBASIC21.65■■□□□ 1.06
ASIC1P78348 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.65■■□□□ 1.06
ASIC1P78348 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.65■■□□□ 1.06
ASIC1P78348 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ASIC1P78348 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
ASIC1P78348 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
ASIC1P78348 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.64■■□□□ 1.06
ASIC1P78348 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.64■■□□□ 1.06
ASIC1P78348 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
ASIC1P78348 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.64■■□□□ 1.06
ASIC1P78348 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.64■■□□□ 1.06
ASIC1P78348 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ASIC1P78348 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ASIC1P78348 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ASIC1P78348 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.64■■□□□ 1.05
ASIC1P78348 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.64■■□□□ 1.05
ASIC1P78348 KRT17P3-201ENST00000420566 1262 ntBASIC21.64■■□□□ 1.05
ASIC1P78348 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.64■■□□□ 1.05
ASIC1P78348 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.64■■□□□ 1.05
ASIC1P78348 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.64■■□□□ 1.05
ASIC1P78348 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
ASIC1P78348 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ASIC1P78348 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.64■■□□□ 1.05
ASIC1P78348 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ASIC1P78348 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.64■■□□□ 1.05
ASIC1P78348 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.63■■□□□ 1.05
ASIC1P78348 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.63■■□□□ 1.05
ASIC1P78348 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.63■■□□□ 1.05
ASIC1P78348 ESRRAP1-201ENST00000400596 1257 ntBASIC21.63■■□□□ 1.05
ASIC1P78348 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.63■■□□□ 1.05
ASIC1P78348 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.63■■□□□ 1.05
ASIC1P78348 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.63■■□□□ 1.05
ASIC1P78348 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.63■■□□□ 1.05
ASIC1P78348 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.63■■□□□ 1.05
ASIC1P78348 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ASIC1P78348 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ASIC1P78348 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms