Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.74□□□□□ -0.21
RPL39P62891 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL39P62891 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.74□□□□□ -0.21
RPL39P62891 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RPL39P62891 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.74□□□□□ -0.21
RPL39P62891 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
RPL39P62891 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 COX20-201ENST00000366528 568 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 AC027612.3-201ENST00000413684 1047 ntBASIC13.73□□□□□ -0.21
RPL39P62891 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 TERF1P2-201ENST00000583350 1212 ntBASIC13.73□□□□□ -0.21
RPL39P62891 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
RPL39P62891 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.73□□□□□ -0.21
RPL39P62891 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.73□□□□□ -0.21
RPL39P62891 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RPL39P62891 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RPL39P62891 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.72□□□□□ -0.21
RPL39P62891 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
RPL39P62891 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 AC135050.7-201ENST00000624508 2218 ntBASIC13.72□□□□□ -0.21
RPL39P62891 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 PHGDH-210ENST00000641115 1638 ntBASIC13.72□□□□□ -0.21
RPL39P62891 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.72□□□□□ -0.21
RPL39P62891 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.72□□□□□ -0.21
RPL39P62891 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.72□□□□□ -0.21
RPL39P62891 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 WIZP1-201ENST00000531444 2299 ntBASIC13.72□□□□□ -0.21
RPL39P62891 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 BCL2-203ENST00000589955 5011 ntBASIC13.72□□□□□ -0.21
RPL39P62891 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
RPL39P62891 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.72□□□□□ -0.21
RPL39P62891 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RPL39P62891 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.72□□□□□ -0.21
RPL39P62891 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
RPL39P62891 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL39P62891 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.71□□□□□ -0.21
RPL39P62891 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RPL39P62891 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RPL39P62891 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.71□□□□□ -0.21
RPL39P62891 SUDS3P1-201ENST00000505831 966 ntBASIC13.71□□□□□ -0.21
RPL39P62891 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.71□□□□□ -0.21
RPL39P62891 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms