Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.7■□□□□ 0.42
CXCR4P61073 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.7■□□□□ 0.42
CXCR4P61073 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXCR4P61073 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.7■□□□□ 0.42
CXCR4P61073 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CXCR4P61073 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CXCR4P61073 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.7■□□□□ 0.42
CXCR4P61073 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CXCR4P61073 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
CXCR4P61073 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CXCR4P61073 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 CYP21A1P-202ENST00000354927 1481 ntBASIC17.69■□□□□ 0.42
CXCR4P61073 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCR4P61073 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CXCR4P61073 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CXCR4P61073 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CXCR4P61073 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.69■□□□□ 0.42
CXCR4P61073 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.69■□□□□ 0.42
CXCR4P61073 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.69■□□□□ 0.42
CXCR4P61073 KRT18P61-201ENST00000585825 1298 ntBASIC17.69■□□□□ 0.42
CXCR4P61073 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.69■□□□□ 0.42
CXCR4P61073 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCR4P61073 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCR4P61073 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXCR4P61073 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
CXCR4P61073 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCR4P61073 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CXCR4P61073 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCR4P61073 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CXCR4P61073 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCR4P61073 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CXCR4P61073 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CXCR4P61073 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CXCR4P61073 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.68■□□□□ 0.42
CXCR4P61073 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.68■□□□□ 0.42
CXCR4P61073 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCR4P61073 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.68■□□□□ 0.42
CXCR4P61073 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.68■□□□□ 0.42
CXCR4P61073 AL591742.1-201ENST00000604433 565 ntBASIC17.68■□□□□ 0.42
CXCR4P61073 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CXCR4P61073 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CXCR4P61073 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 FP475955.4-201ENST00000623131 1990 ntBASIC17.68■□□□□ 0.42
CXCR4P61073 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXCR4P61073 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.67■□□□□ 0.42
CXCR4P61073 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.67■□□□□ 0.42
CXCR4P61073 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXCR4P61073 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CXCR4P61073 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms