Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
FOXA3P55318 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
FOXA3P55318 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
FOXA3P55318 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
FOXA3P55318 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 PGM5P4-201ENST00000421970 445 ntBASIC14.57□□□□□ -0.08
FOXA3P55318 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
FOXA3P55318 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.57□□□□□ -0.08
FOXA3P55318 AC008764.7-201ENST00000593779 1081 ntBASIC14.57□□□□□ -0.08
FOXA3P55318 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.57□□□□□ -0.08
FOXA3P55318 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.57□□□□□ -0.08
FOXA3P55318 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.57□□□□□ -0.08
FOXA3P55318 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.57□□□□□ -0.08
FOXA3P55318 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
FOXA3P55318 KRT16P6-202ENST00000425692 1426 ntBASIC14.57□□□□□ -0.08
FOXA3P55318 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.57□□□□□ -0.08
FOXA3P55318 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
FOXA3P55318 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 BICD1-207ENST00000551848 1962 ntBASIC14.56□□□□□ -0.08
FOXA3P55318 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.56□□□□□ -0.08
FOXA3P55318 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.56□□□□□ -0.08
FOXA3P55318 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
FOXA3P55318 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 UNC93B3-201ENST00000308076 687 ntBASIC14.56□□□□□ -0.08
FOXA3P55318 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.56□□□□□ -0.08
FOXA3P55318 AC131281.2-201ENST00000520478 145 ntBASIC14.56□□□□□ -0.08
FOXA3P55318 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 AC012414.1-201ENST00000556676 535 ntBASIC14.56□□□□□ -0.08
FOXA3P55318 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.56□□□□□ -0.08
FOXA3P55318 TPRG1LP1-201ENST00000598702 760 ntBASIC14.56□□□□□ -0.08
FOXA3P55318 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.56□□□□□ -0.08
FOXA3P55318 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
FOXA3P55318 KRT8P17-201ENST00000453110 1448 ntBASIC14.56□□□□□ -0.08
FOXA3P55318 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
FOXA3P55318 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.56□□□□□ -0.08
FOXA3P55318 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
FOXA3P55318 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.56□□□□□ -0.08
FOXA3P55318 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.56□□□□□ -0.08
FOXA3P55318 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
FOXA3P55318 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.56□□□□□ -0.08
FOXA3P55318 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
FOXA3P55318 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 AC010141.2-201ENST00000452426 721 ntBASIC14.55□□□□□ -0.08
FOXA3P55318 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 AL355001.2-201ENST00000620617 1191 ntBASIC14.55□□□□□ -0.08
FOXA3P55318 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
FOXA3P55318 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.55□□□□□ -0.08
FOXA3P55318 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
FOXA3P55318 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FOXA3P55318 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms