Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC4P55056 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC4P55056 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOC4P55056 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 MIR1238-201ENST00000408483 83 ntBASIC14.24□□□□□ -0.13
APOC4P55056 AC004980.1-204ENST00000429707 299 ntBASIC14.24□□□□□ -0.13
APOC4P55056 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.24□□□□□ -0.13
APOC4P55056 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC4P55056 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC4P55056 HLA-A-209ENST00000638375 975 ntBASIC14.24□□□□□ -0.13
APOC4P55056 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOC4P55056 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC4P55056 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOC4P55056 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOC4P55056 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
APOC4P55056 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 ECEL1P3-201ENST00000427961 737 ntBASIC14.23□□□□□ -0.13
APOC4P55056 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC4P55056 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.23□□□□□ -0.13
APOC4P55056 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.23□□□□□ -0.13
APOC4P55056 NAPSB-206ENST00000562112 1266 ntBASIC14.23□□□□□ -0.13
APOC4P55056 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.23□□□□□ -0.13
APOC4P55056 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC4P55056 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.23□□□□□ -0.13
APOC4P55056 AP000525.1-201ENST00000608286 694 ntBASIC14.23□□□□□ -0.13
APOC4P55056 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.23□□□□□ -0.13
APOC4P55056 AL691432.2-201ENST00000607222 2038 ntBASIC14.23□□□□□ -0.13
APOC4P55056 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOC4P55056 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC4P55056 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC4P55056 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
APOC4P55056 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
APOC4P55056 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
APOC4P55056 AC004951.3-201ENST00000418645 1148 ntBASIC14.22□□□□□ -0.13
APOC4P55056 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC4P55056 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.22□□□□□ -0.13
APOC4P55056 B3GAT3P1-201ENST00000471720 806 ntBASIC14.22□□□□□ -0.13
APOC4P55056 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
APOC4P55056 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 C2orf69P3-201ENST00000565542 1120 ntBASIC14.22□□□□□ -0.13
APOC4P55056 AL160286.2-201ENST00000567150 934 ntBASIC14.22□□□□□ -0.13
APOC4P55056 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.22□□□□□ -0.13
APOC4P55056 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC4P55056 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.22□□□□□ -0.13
APOC4P55056 AC011298.2-201ENST00000617989 482 ntBASIC14.22□□□□□ -0.13
APOC4P55056 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
APOC4P55056 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC4P55056 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
APOC4P55056 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.22□□□□□ -0.13
APOC4P55056 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.22□□□□□ -0.13
APOC4P55056 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC4P55056 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms