Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PMS1P54277 AC141586.3-201ENST00000562166 1838 ntBASIC21.39■■□□□ 1.01
PMS1P54277 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PMS1P54277 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.38■■□□□ 1.01
PMS1P54277 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.38■■□□□ 1.01
PMS1P54277 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
PMS1P54277 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.38■■□□□ 1.01
PMS1P54277 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.38■■□□□ 1.01
PMS1P54277 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.38■■□□□ 1.01
PMS1P54277 AL121829.2-201ENST00000620908 328 ntBASIC21.38■■□□□ 1.01
PMS1P54277 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.38■■□□□ 1.01
PMS1P54277 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PMS1P54277 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PMS1P54277 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.37■■□□□ 1.01
PMS1P54277 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS1P54277 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.37■■□□□ 1.01
PMS1P54277 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PMS1P54277 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PMS1P54277 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PMS1P54277 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.37■■□□□ 1.01
PMS1P54277 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS1P54277 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
PMS1P54277 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.37■■□□□ 1.01
PMS1P54277 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.37■■□□□ 1.01
PMS1P54277 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PMS1P54277 UNC93B5-201ENST00000530315 699 ntBASIC21.37■■□□□ 1.01
PMS1P54277 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.37■■□□□ 1.01
PMS1P54277 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PMS1P54277 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS1P54277 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS1P54277 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.37■■□□□ 1.01
PMS1P54277 KRT8P8-201ENST00000434750 1448 ntBASIC21.37■■□□□ 1.01
PMS1P54277 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PMS1P54277 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.36■■□□□ 1.01
PMS1P54277 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.36■■□□□ 1.01
PMS1P54277 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.36■■□□□ 1.01
PMS1P54277 KRT18P16-201ENST00000510337 1294 ntBASIC21.36■■□□□ 1.01
PMS1P54277 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.36■■□□□ 1.01
PMS1P54277 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.36■■□□□ 1.01
PMS1P54277 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.36■■□□□ 1.01
PMS1P54277 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.36■■□□□ 1.01
PMS1P54277 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.36■■□□□ 1.01
PMS1P54277 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PMS1P54277 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PMS1P54277 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.35■■□□□ 1.01
PMS1P54277 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.35■■□□□ 1.01
PMS1P54277 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PMS1P54277 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PMS1P54277 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PMS1P54277 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
PMS1P54277 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.35■■□□□ 1.01
PMS1P54277 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.35■■□□□ 1.01
PMS1P54277 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.35■■□□□ 1.01
PMS1P54277 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
PMS1P54277 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.35■■□□□ 1.01
PMS1P54277 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.35■■□□□ 1.01
PMS1P54277 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PMS1P54277 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.35■■□□□ 1.01
PMS1P54277 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.35■■□□□ 1.01
PMS1P54277 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PMS1P54277 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.35■■□□□ 1.01
PMS1P54277 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PMS1P54277 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PMS1P54277 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.34■■□□□ 1.01
PMS1P54277 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PMS1P54277 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms