Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC093484.2-201ENST00000580996 2166 ntBASIC18.17■□□□□ 0.5
SMSP52788 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMSP52788 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.17■□□□□ 0.5
SMSP52788 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SMSP52788 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMSP52788 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SMSP52788 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SMSP52788 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SMSP52788 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.16■□□□□ 0.5
SMSP52788 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SMSP52788 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SMSP52788 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.16■□□□□ 0.5
SMSP52788 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.16■□□□□ 0.5
SMSP52788 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SMSP52788 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.16■□□□□ 0.5
SMSP52788 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.16■□□□□ 0.5
SMSP52788 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMSP52788 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.15■□□□□ 0.5
SMSP52788 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SMSP52788 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 AL390719.1-204ENST00000412397 1219 ntBASIC18.15■□□□□ 0.5
SMSP52788 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 AC133681.1-201ENST00000465482 601 ntBASIC18.15■□□□□ 0.5
SMSP52788 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.15■□□□□ 0.5
SMSP52788 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.15■□□□□ 0.5
SMSP52788 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 MIR4785-201ENST00000585005 73 ntBASIC18.15■□□□□ 0.5
SMSP52788 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.15■□□□□ 0.5
SMSP52788 MTDHP1-201ENST00000605323 784 ntBASIC18.15■□□□□ 0.5
SMSP52788 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.15■□□□□ 0.5
SMSP52788 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
SMSP52788 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMSP52788 TNXA-203ENST00000507684 2038 ntBASIC18.15■□□□□ 0.5
SMSP52788 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMSP52788 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SMSP52788 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMSP52788 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SMSP52788 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 AL023875.1-201ENST00000640777 796 ntBASIC18.14■□□□□ 0.49
SMSP52788 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMSP52788 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.14■□□□□ 0.49
SMSP52788 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.14■□□□□ 0.49
SMSP52788 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms