Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASP4P49662 LINC01465-201ENST00000408887 1940 ntBASIC21.19■□□□□ 0.98
CASP4P49662 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASP4P49662 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASP4P49662 SDHAP1-207ENST00000440850 2000 ntBASIC21.19■□□□□ 0.98
CASP4P49662 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASP4P49662 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CASP4P49662 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASP4P49662 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASP4P49662 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CASP4P49662 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.19■□□□□ 0.98
CASP4P49662 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CASP4P49662 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.19■□□□□ 0.98
CASP4P49662 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CASP4P49662 RPPH1-201ENST00000516869 333 ntBASIC21.19■□□□□ 0.98
CASP4P49662 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.19■□□□□ 0.98
CASP4P49662 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.19■□□□□ 0.98
CASP4P49662 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.19■□□□□ 0.98
CASP4P49662 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASP4P49662 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASP4P49662 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASP4P49662 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.19■□□□□ 0.98
CASP4P49662 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.19■□□□□ 0.98
CASP4P49662 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CASP4P49662 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.19■□□□□ 0.98
CASP4P49662 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CASP4P49662 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASP4P49662 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CASP4P49662 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
CASP4P49662 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CASP4P49662 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.18■□□□□ 0.98
CASP4P49662 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.18■□□□□ 0.98
CASP4P49662 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CASP4P49662 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.18■□□□□ 0.98
CASP4P49662 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.18■□□□□ 0.98
CASP4P49662 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CASP4P49662 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASP4P49662 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASP4P49662 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CASP4P49662 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CASP4P49662 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.18■□□□□ 0.98
CASP4P49662 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASP4P49662 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.18■□□□□ 0.98
CASP4P49662 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CASP4P49662 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.17■□□□□ 0.98
CASP4P49662 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CASP4P49662 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CASP4P49662 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.17■□□□□ 0.98
CASP4P49662 AC133681.1-201ENST00000465482 601 ntBASIC21.17■□□□□ 0.98
CASP4P49662 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CASP4P49662 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.17■□□□□ 0.98
CASP4P49662 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.17■□□□□ 0.98
CASP4P49662 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 AL359736.2-201ENST00000621992 437 ntBASIC21.17■□□□□ 0.98
CASP4P49662 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CASP4P49662 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.17■□□□□ 0.98
CASP4P49662 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CASP4P49662 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.17■□□□□ 0.98
CASP4P49662 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.17■□□□□ 0.98
CASP4P49662 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASP4P49662 AC087289.5-201ENST00000586076 3175 ntBASIC21.17■□□□□ 0.98
CASP4P49662 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CASP4P49662 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CASP4P49662 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CASP4P49662 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CASP4P49662 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.16■□□□□ 0.98
CASP4P49662 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CASP4P49662 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.16■□□□□ 0.98
CASP4P49662 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CASP4P49662 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.16■□□□□ 0.98
CASP4P49662 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.16■□□□□ 0.98
CASP4P49662 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CASP4P49662 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.15■□□□□ 0.98
CASP4P49662 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASP4P49662 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.15■□□□□ 0.98
CASP4P49662 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASP4P49662 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASP4P49662 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASP4P49662 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CASP4P49662 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.15■□□□□ 0.98
CASP4P49662 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms