Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
BRCC3P46736 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.7■□□□□ 0.9
BRCC3P46736 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.7■□□□□ 0.9
BRCC3P46736 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.7■□□□□ 0.9
BRCC3P46736 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.7■□□□□ 0.9
BRCC3P46736 AC092865.7-201ENST00000641832 219 ntBASIC20.7■□□□□ 0.9
BRCC3P46736 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCC3P46736 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCC3P46736 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRCC3P46736 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
BRCC3P46736 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRCC3P46736 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BRCC3P46736 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
BRCC3P46736 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.69■□□□□ 0.9
BRCC3P46736 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRCC3P46736 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCC3P46736 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCC3P46736 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRCC3P46736 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCC3P46736 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCC3P46736 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRCC3P46736 AL137013.1-201ENST00000432946 1228 ntBASIC20.69■□□□□ 0.9
BRCC3P46736 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.69■□□□□ 0.9
BRCC3P46736 EGLN1P1-201ENST00000531623 762 ntBASIC20.69■□□□□ 0.9
BRCC3P46736 AC010203.1-204ENST00000548782 407 ntBASIC20.69■□□□□ 0.9
BRCC3P46736 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.69■□□□□ 0.9
BRCC3P46736 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.69■□□□□ 0.9
BRCC3P46736 AC096733.2-201ENST00000609937 1394 ntBASIC20.69■□□□□ 0.9
BRCC3P46736 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCC3P46736 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCC3P46736 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCC3P46736 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCC3P46736 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCC3P46736 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
BRCC3P46736 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BRCC3P46736 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCC3P46736 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.68■□□□□ 0.9
BRCC3P46736 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
BRCC3P46736 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.68■□□□□ 0.9
BRCC3P46736 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
BRCC3P46736 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCC3P46736 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 AC073508.3-201ENST00000619697 1419 ntBASIC20.68■□□□□ 0.9
BRCC3P46736 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCC3P46736 KRT8P41-201ENST00000533985 1514 ntBASIC20.68■□□□□ 0.9
BRCC3P46736 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRCC3P46736 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.67■□□□□ 0.9
BRCC3P46736 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.67■□□□□ 0.9
BRCC3P46736 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRCC3P46736 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.67■□□□□ 0.9
BRCC3P46736 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRCC3P46736 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.67■□□□□ 0.9
BRCC3P46736 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.67■□□□□ 0.9
BRCC3P46736 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.67■□□□□ 0.9
BRCC3P46736 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRCC3P46736 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.67■□□□□ 0.9
BRCC3P46736 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BRCC3P46736 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRCC3P46736 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BRCC3P46736 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.67■□□□□ 0.9
BRCC3P46736 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRCC3P46736 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRCC3P46736 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRCC3P46736 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCC3P46736 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCC3P46736 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCC3P46736 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCC3P46736 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.66■□□□□ 0.9
BRCC3P46736 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCC3P46736 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCC3P46736 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCC3P46736 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCC3P46736 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.65■□□□□ 0.9
BRCC3P46736 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
BRCC3P46736 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCC3P46736 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms