Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
HADHAP40939 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.64■□□□□ 0.73
HADHAP40939 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.64■□□□□ 0.73
HADHAP40939 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.64■□□□□ 0.73
HADHAP40939 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HADHAP40939 AP006587.1-201ENST00000534129 1502 ntBASIC19.64■□□□□ 0.73
HADHAP40939 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HADHAP40939 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HADHAP40939 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HADHAP40939 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 AC098818.2-201ENST00000564925 2320 ntBASIC19.64■□□□□ 0.73
HADHAP40939 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HADHAP40939 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HADHAP40939 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HADHAP40939 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.63■□□□□ 0.73
HADHAP40939 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HADHAP40939 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HADHAP40939 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.63■□□□□ 0.73
HADHAP40939 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.63■□□□□ 0.73
HADHAP40939 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HADHAP40939 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
HADHAP40939 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.63■□□□□ 0.73
HADHAP40939 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
HADHAP40939 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.63■□□□□ 0.73
HADHAP40939 PRKY-204ENST00000533551 1019 ntBASIC19.63■□□□□ 0.73
HADHAP40939 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.63■□□□□ 0.73
HADHAP40939 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HADHAP40939 AP000974.1-201ENST00000623909 2387 ntBASIC19.63■□□□□ 0.73
HADHAP40939 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.62■□□□□ 0.73
HADHAP40939 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
HADHAP40939 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HADHAP40939 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 ESRRAP1-201ENST00000400596 1257 ntBASIC19.62■□□□□ 0.73
HADHAP40939 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.62■□□□□ 0.73
HADHAP40939 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
HADHAP40939 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.62■□□□□ 0.73
HADHAP40939 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.62■□□□□ 0.73
HADHAP40939 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HADHAP40939 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HADHAP40939 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.61■□□□□ 0.73
HADHAP40939 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HADHAP40939 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.61■□□□□ 0.73
HADHAP40939 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HADHAP40939 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
HADHAP40939 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HADHAP40939 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HADHAP40939 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HADHAP40939 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.61■□□□□ 0.73
HADHAP40939 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HADHAP40939 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.61■□□□□ 0.73
HADHAP40939 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.61■□□□□ 0.73
HADHAP40939 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HADHAP40939 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.61■□□□□ 0.73
HADHAP40939 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HADHAP40939 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.61■□□□□ 0.73
HADHAP40939 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HADHAP40939 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HADHAP40939 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HADHAP40939 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HADHAP40939 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.61■□□□□ 0.73
HADHAP40939 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HADHAP40939 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HADHAP40939 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HADHAP40939 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
HADHAP40939 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HADHAP40939 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HADHAP40939 TNXA-203ENST00000507684 2038 ntBASIC19.6■□□□□ 0.73
HADHAP40939 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HADHAP40939 YBX1P10-201ENST00000444752 975 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms