Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRT20P35900 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 BCL2-203ENST00000589955 5011 ntBASIC18.43■□□□□ 0.54
KRT20P35900 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT20P35900 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT20P35900 AC093484.2-201ENST00000580996 2166 ntBASIC18.43■□□□□ 0.54
KRT20P35900 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KRT20P35900 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.43■□□□□ 0.54
KRT20P35900 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.43■□□□□ 0.54
KRT20P35900 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.43■□□□□ 0.54
KRT20P35900 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT20P35900 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
KRT20P35900 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
KRT20P35900 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT20P35900 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT20P35900 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KRT20P35900 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.43■□□□□ 0.54
KRT20P35900 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
KRT20P35900 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.42■□□□□ 0.54
KRT20P35900 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.42■□□□□ 0.54
KRT20P35900 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.42■□□□□ 0.54
KRT20P35900 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.42■□□□□ 0.54
KRT20P35900 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.42■□□□□ 0.54
KRT20P35900 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
KRT20P35900 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
KRT20P35900 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 BX119927.1-201ENST00000636596 1552 ntBASIC18.42■□□□□ 0.54
KRT20P35900 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRT20P35900 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
KRT20P35900 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
KRT20P35900 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
KRT20P35900 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.41■□□□□ 0.54
KRT20P35900 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.41■□□□□ 0.54
KRT20P35900 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.41■□□□□ 0.54
KRT20P35900 AC006557.6-201ENST00000623071 864 ntBASIC18.41■□□□□ 0.54
KRT20P35900 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.41■□□□□ 0.54
KRT20P35900 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.41■□□□□ 0.54
KRT20P35900 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
KRT20P35900 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
KRT20P35900 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.41■□□□□ 0.54
KRT20P35900 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
KRT20P35900 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRT20P35900 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
KRT20P35900 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KRT20P35900 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT20P35900 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.4■□□□□ 0.54
KRT20P35900 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.4■□□□□ 0.54
KRT20P35900 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KRT20P35900 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.4■□□□□ 0.54
KRT20P35900 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms