Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.66■□□□□ 0.58
CCKBRP32239 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCKBRP32239 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCKBRP32239 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.65■□□□□ 0.58
CCKBRP32239 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.65■□□□□ 0.58
CCKBRP32239 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.65■□□□□ 0.58
CCKBRP32239 AK4P3-201ENST00000418260 669 ntBASIC18.65■□□□□ 0.58
CCKBRP32239 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCKBRP32239 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.65■□□□□ 0.58
CCKBRP32239 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.65■□□□□ 0.58
CCKBRP32239 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.65■□□□□ 0.58
CCKBRP32239 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.65■□□□□ 0.58
CCKBRP32239 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.65■□□□□ 0.58
CCKBRP32239 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCKBRP32239 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCKBRP32239 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.64■□□□□ 0.58
CCKBRP32239 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCKBRP32239 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCKBRP32239 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCKBRP32239 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCKBRP32239 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.64■□□□□ 0.57
CCKBRP32239 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 AC063952.2-201ENST00000498792 1227 ntBASIC18.64■□□□□ 0.57
CCKBRP32239 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.64■□□□□ 0.57
CCKBRP32239 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCKBRP32239 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
CCKBRP32239 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCKBRP32239 AC010653.2-201ENST00000623505 997 ntBASIC18.64■□□□□ 0.57
CCKBRP32239 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCKBRP32239 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCKBRP32239 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 KRT8P8-201ENST00000434750 1448 ntBASIC18.64■□□□□ 0.57
CCKBRP32239 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.64■□□□□ 0.57
CCKBRP32239 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCKBRP32239 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCKBRP32239 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCKBRP32239 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.63■□□□□ 0.57
CCKBRP32239 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.63■□□□□ 0.57
CCKBRP32239 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCKBRP32239 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.63■□□□□ 0.57
CCKBRP32239 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCKBRP32239 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.63■□□□□ 0.57
CCKBRP32239 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.63■□□□□ 0.57
CCKBRP32239 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.63■□□□□ 0.57
CCKBRP32239 AC022616.7-201ENST00000525383 220 ntBASIC18.63■□□□□ 0.57
CCKBRP32239 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.63■□□□□ 0.57
CCKBRP32239 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.63■□□□□ 0.57
CCKBRP32239 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.63■□□□□ 0.57
CCKBRP32239 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCKBRP32239 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.63■□□□□ 0.57
CCKBRP32239 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCKBRP32239 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCKBRP32239 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCKBRP32239 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCKBRP32239 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.62■□□□□ 0.57
CCKBRP32239 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCKBRP32239 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCKBRP32239 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCKBRP32239 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCKBRP32239 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCKBRP32239 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.62■□□□□ 0.57
CCKBRP32239 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms