Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMBP28068 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMBP28068 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMBP28068 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.78□□□□□ -0.04
HLA-DMBP28068 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMBP28068 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMBP28068 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DMBP28068 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DMBP28068 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 AC116351.2-201ENST00000606540 1585 ntBASIC14.77□□□□□ -0.04
HLA-DMBP28068 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DMBP28068 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.77□□□□□ -0.04
HLA-DMBP28068 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 AC073210.2-201ENST00000430369 194 ntBASIC14.77□□□□□ -0.05
HLA-DMBP28068 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 KRT18P6-201ENST00000555540 1265 ntBASIC14.77□□□□□ -0.05
HLA-DMBP28068 AC098934.4-201ENST00000564127 592 ntBASIC14.77□□□□□ -0.05
HLA-DMBP28068 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DMBP28068 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DMBP28068 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 AC124283.5-201ENST00000624661 1809 ntBASIC14.76□□□□□ -0.05
HLA-DMBP28068 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 AC006557.6-201ENST00000623071 864 ntBASIC14.76□□□□□ -0.05
HLA-DMBP28068 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DMBP28068 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DMBP28068 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms