Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO1P25800 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LMO1P25800 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.32■□□□□ 0.2
LMO1P25800 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO1P25800 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMO1P25800 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.32■□□□□ 0.2
LMO1P25800 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LMO1P25800 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.32■□□□□ 0.2
LMO1P25800 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.32■□□□□ 0.2
LMO1P25800 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.32■□□□□ 0.2
LMO1P25800 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LMO1P25800 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO1P25800 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LMO1P25800 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMO1P25800 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
LMO1P25800 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.31■□□□□ 0.2
LMO1P25800 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.31■□□□□ 0.2
LMO1P25800 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LMO1P25800 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.31■□□□□ 0.2
LMO1P25800 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.31■□□□□ 0.2
LMO1P25800 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LMO1P25800 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.31■□□□□ 0.2
LMO1P25800 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LMO1P25800 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.31■□□□□ 0.2
LMO1P25800 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LMO1P25800 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.31■□□□□ 0.2
LMO1P25800 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LMO1P25800 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.31■□□□□ 0.2
LMO1P25800 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.31■□□□□ 0.2
LMO1P25800 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMO1P25800 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LMO1P25800 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LMO1P25800 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 KRT8P8-201ENST00000434750 1448 ntBASIC16.3■□□□□ 0.2
LMO1P25800 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO1P25800 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LMO1P25800 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.3■□□□□ 0.2
LMO1P25800 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO1P25800 POM121L13P-201ENST00000422362 380 ntBASIC16.3■□□□□ 0.2
LMO1P25800 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.3■□□□□ 0.2
LMO1P25800 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.3■□□□□ 0.2
LMO1P25800 KRT18P16-201ENST00000510337 1294 ntBASIC16.3■□□□□ 0.2
LMO1P25800 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.3■□□□□ 0.2
LMO1P25800 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO1P25800 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO1P25800 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
LMO1P25800 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMO1P25800 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO1P25800 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LMO1P25800 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LMO1P25800 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.29■□□□□ 0.2
LMO1P25800 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 ZNF815P-204ENST00000434898 1737 ntBASIC16.29■□□□□ 0.2
LMO1P25800 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO1P25800 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.29■□□□□ 0.2
LMO1P25800 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO1P25800 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.29■□□□□ 0.2
LMO1P25800 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.29■□□□□ 0.2
LMO1P25800 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LMO1P25800 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms