Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB3BP20337 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB3BP20337 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3BP20337 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3BP20337 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RAB3BP20337 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB3BP20337 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB3BP20337 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB3BP20337 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3BP20337 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.02■□□□□ 0.31
RAB3BP20337 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAB3BP20337 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RAB3BP20337 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.02■□□□□ 0.31
RAB3BP20337 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.01■□□□□ 0.31
RAB3BP20337 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3BP20337 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3BP20337 TEX21P-204ENST00000641479 1693 ntBASIC17.01■□□□□ 0.31
RAB3BP20337 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 LTB4R2-202ENST00000528054 3092 ntBASIC17.01■□□□□ 0.31
RAB3BP20337 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3BP20337 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3BP20337 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.01■□□□□ 0.31
RAB3BP20337 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 AC008406.3-201ENST00000620001 1374 ntBASIC17.01■□□□□ 0.31
RAB3BP20337 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RAB3BP20337 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAB3BP20337 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17■□□□□ 0.31
RAB3BP20337 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17■□□□□ 0.31
RAB3BP20337 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17■□□□□ 0.31
RAB3BP20337 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 COX20-201ENST00000366528 568 ntTSL 2 BASIC17■□□□□ 0.31
RAB3BP20337 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17■□□□□ 0.31
RAB3BP20337 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17■□□□□ 0.31
RAB3BP20337 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 AL591742.1-201ENST00000604433 565 ntBASIC17■□□□□ 0.31
RAB3BP20337 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RAB3BP20337 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
RAB3BP20337 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAB3BP20337 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB3BP20337 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
RAB3BP20337 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB3BP20337 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RAB3BP20337 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB3BP20337 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
RAB3BP20337 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
RAB3BP20337 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB3BP20337 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 SUDS3P1-201ENST00000505831 966 ntBASIC16.99■□□□□ 0.31
RAB3BP20337 AC110285.6-201ENST00000617652 491 ntBASIC16.99■□□□□ 0.31
RAB3BP20337 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB3BP20337 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB3BP20337 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB3BP20337 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 AL031598.1-201ENST00000561511 1773 ntBASIC16.99■□□□□ 0.31
RAB3BP20337 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RAB3BP20337 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3BP20337 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms