Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.76■□□□□ 0.75
NFKB1P19838 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NFKB1P19838 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.76■□□□□ 0.75
NFKB1P19838 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.76■□□□□ 0.75
NFKB1P19838 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.76■□□□□ 0.75
NFKB1P19838 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.76■□□□□ 0.75
NFKB1P19838 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 AC006058.3-201ENST00000606217 1069 ntBASIC19.76■□□□□ 0.75
NFKB1P19838 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.76■□□□□ 0.75
NFKB1P19838 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NFKB1P19838 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.75■□□□□ 0.75
NFKB1P19838 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.75■□□□□ 0.75
NFKB1P19838 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
NFKB1P19838 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.75■□□□□ 0.75
NFKB1P19838 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.75■□□□□ 0.75
NFKB1P19838 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.75■□□□□ 0.75
NFKB1P19838 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NFKB1P19838 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 AL023875.1-201ENST00000640777 796 ntBASIC19.75■□□□□ 0.75
NFKB1P19838 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.75■□□□□ 0.75
NFKB1P19838 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.75■□□□□ 0.75
NFKB1P19838 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NFKB1P19838 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NFKB1P19838 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.74■□□□□ 0.75
NFKB1P19838 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
NFKB1P19838 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.74■□□□□ 0.75
NFKB1P19838 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
NFKB1P19838 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.74■□□□□ 0.75
NFKB1P19838 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
NFKB1P19838 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.74■□□□□ 0.75
NFKB1P19838 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.74■□□□□ 0.75
NFKB1P19838 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.74■□□□□ 0.75
NFKB1P19838 AC073648.6-201ENST00000641589 218 ntBASIC19.74■□□□□ 0.75
NFKB1P19838 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NFKB1P19838 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
NFKB1P19838 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NFKB1P19838 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NFKB1P19838 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.74■□□□□ 0.75
NFKB1P19838 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NFKB1P19838 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.73■□□□□ 0.75
NFKB1P19838 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NFKB1P19838 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.73■□□□□ 0.75
NFKB1P19838 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.73■□□□□ 0.75
NFKB1P19838 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 KRASP1-201ENST00000407852 552 ntBASIC19.73■□□□□ 0.75
NFKB1P19838 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.73■□□□□ 0.75
NFKB1P19838 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.73■□□□□ 0.75
NFKB1P19838 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.73■□□□□ 0.75
NFKB1P19838 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
NFKB1P19838 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NFKB1P19838 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 AC104417.2-201ENST00000562989 1793 ntBASIC19.72■□□□□ 0.75
NFKB1P19838 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NFKB1P19838 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NFKB1P19838 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NFKB1P19838 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NFKB1P19838 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms