Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF1P18846 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.05■□□□□ 0.32
ATF1P18846 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ATF1P18846 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF1P18846 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF1P18846 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF1P18846 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATF1P18846 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.05■□□□□ 0.32
ATF1P18846 AC010980.2-201ENST00000587099 1412 ntBASIC17.04■□□□□ 0.32
ATF1P18846 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.04■□□□□ 0.32
ATF1P18846 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATF1P18846 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.04■□□□□ 0.32
ATF1P18846 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.04■□□□□ 0.32
ATF1P18846 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.04■□□□□ 0.32
ATF1P18846 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.04■□□□□ 0.32
ATF1P18846 C2orf69P4-201ENST00000565394 541 ntBASIC17.04■□□□□ 0.32
ATF1P18846 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.04■□□□□ 0.32
ATF1P18846 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.04■□□□□ 0.32
ATF1P18846 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.04■□□□□ 0.32
ATF1P18846 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATF1P18846 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATF1P18846 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATF1P18846 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ATF1P18846 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.03■□□□□ 0.32
ATF1P18846 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ATF1P18846 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATF1P18846 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 AC023632.3-201ENST00000521633 145 ntBASIC17.03■□□□□ 0.32
ATF1P18846 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.03■□□□□ 0.32
ATF1P18846 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.03■□□□□ 0.32
ATF1P18846 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.03■□□□□ 0.32
ATF1P18846 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 AL390961.4-201ENST00000623958 2535 ntBASIC17.03■□□□□ 0.32
ATF1P18846 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.03■□□□□ 0.32
ATF1P18846 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATF1P18846 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
ATF1P18846 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.02■□□□□ 0.32
ATF1P18846 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 AC018470.1-201ENST00000624790 3129 ntBASIC17.02■□□□□ 0.32
ATF1P18846 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.02■□□□□ 0.32
ATF1P18846 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ATF1P18846 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
ATF1P18846 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.02■□□□□ 0.32
ATF1P18846 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATF1P18846 AL512625.2-201ENST00000417533 625 ntBASIC17.02■□□□□ 0.32
ATF1P18846 AL162430.1-201ENST00000480705 870 ntBASIC17.02■□□□□ 0.32
ATF1P18846 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.02■□□□□ 0.32
ATF1P18846 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.02■□□□□ 0.32
ATF1P18846 AC135050.7-201ENST00000624508 2218 ntBASIC17.02■□□□□ 0.32
ATF1P18846 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATF1P18846 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATF1P18846 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATF1P18846 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATF1P18846 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.02■□□□□ 0.31
ATF1P18846 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATF1P18846 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ATF1P18846 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATF1P18846 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.02■□□□□ 0.31
ATF1P18846 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATF1P18846 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms