Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL2P13500 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCL2P13500 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CCL2P13500 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCL2P13500 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL2P13500 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCL2P13500 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CCL2P13500 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CCL2P13500 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.93■□□□□ 0.3
CCL2P13500 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CCL2P13500 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL2P13500 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL2P13500 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL2P13500 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
CCL2P13500 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL2P13500 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.93■□□□□ 0.3
CCL2P13500 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCL2P13500 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCL2P13500 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL2P13500 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCL2P13500 KRT16P5-201ENST00000455284 522 ntBASIC16.92■□□□□ 0.3
CCL2P13500 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CCL2P13500 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.92■□□□□ 0.3
CCL2P13500 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCL2P13500 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCL2P13500 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL2P13500 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL2P13500 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL2P13500 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCL2P13500 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL2P13500 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCL2P13500 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCL2P13500 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL2P13500 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL2P13500 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCL2P13500 KRT8P8-201ENST00000434750 1448 ntBASIC16.91■□□□□ 0.3
CCL2P13500 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCL2P13500 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL2P13500 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL2P13500 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL2P13500 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.91■□□□□ 0.3
CCL2P13500 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL2P13500 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL2P13500 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL2P13500 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CCL2P13500 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL2P13500 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL2P13500 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCL2P13500 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL2P13500 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL2P13500 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL2P13500 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL2P13500 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms