Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.25■□□□□ 0.99
CLTAP09496 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLTAP09496 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.25■□□□□ 0.99
CLTAP09496 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLTAP09496 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.25■□□□□ 0.99
CLTAP09496 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CLTAP09496 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLTAP09496 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CLTAP09496 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLTAP09496 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.24■□□□□ 0.99
CLTAP09496 AFG3L1P-217ENST00000557444 2447 ntBASIC21.24■□□□□ 0.99
CLTAP09496 KRT8P8-201ENST00000434750 1448 ntBASIC21.24■□□□□ 0.99
CLTAP09496 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.24■□□□□ 0.99
CLTAP09496 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.24■□□□□ 0.99
CLTAP09496 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.24■□□□□ 0.99
CLTAP09496 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.24■□□□□ 0.99
CLTAP09496 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.24■□□□□ 0.99
CLTAP09496 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.24■□□□□ 0.99
CLTAP09496 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.24■□□□□ 0.99
CLTAP09496 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.24■□□□□ 0.99
CLTAP09496 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLTAP09496 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.23■□□□□ 0.99
CLTAP09496 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.23■□□□□ 0.99
CLTAP09496 KSR1P1-201ENST00000446298 240 ntBASIC21.23■□□□□ 0.99
CLTAP09496 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.23■□□□□ 0.99
CLTAP09496 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 CD177P1-201ENST00000606252 935 ntBASIC21.23■□□□□ 0.99
CLTAP09496 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLTAP09496 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CLTAP09496 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.23■□□□□ 0.99
CLTAP09496 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.23■□□□□ 0.99
CLTAP09496 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CLTAP09496 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLTAP09496 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
CLTAP09496 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTAP09496 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTAP09496 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CLTAP09496 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.22■□□□□ 0.99
CLTAP09496 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTAP09496 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.22■□□□□ 0.99
CLTAP09496 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.22■□□□□ 0.99
CLTAP09496 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTAP09496 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.22■□□□□ 0.99
CLTAP09496 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLTAP09496 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.21■□□□□ 0.99
CLTAP09496 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CLTAP09496 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLTAP09496 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.21■□□□□ 0.99
CLTAP09496 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 FAM197Y1-201ENST00000421178 764 ntBASIC21.21■□□□□ 0.99
CLTAP09496 TSPY7P-201ENST00000431358 1114 ntBASIC21.21■□□□□ 0.99
CLTAP09496 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.21■□□□□ 0.99
CLTAP09496 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.21■□□□□ 0.99
CLTAP09496 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.21■□□□□ 0.99
CLTAP09496 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLTAP09496 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLTAP09496 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.21■□□□□ 0.99
CLTAP09496 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CLTAP09496 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.21■□□□□ 0.99
CLTAP09496 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLTAP09496 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.2■□□□□ 0.98
CLTAP09496 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLTAP09496 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CLTAP09496 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms