Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.6■□□□□ 0.73
RETP07949 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.6■□□□□ 0.73
RETP07949 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.6■□□□□ 0.73
RETP07949 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.6■□□□□ 0.73
RETP07949 SLC25A1P4-201ENST00000567977 778 ntBASIC19.6■□□□□ 0.73
RETP07949 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.6■□□□□ 0.73
RETP07949 AL691432.3-201ENST00000621860 400 ntBASIC19.6■□□□□ 0.73
RETP07949 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RETP07949 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 AC011484.1-201ENST00000377652 1995 ntBASIC19.6■□□□□ 0.73
RETP07949 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RETP07949 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RETP07949 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RETP07949 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RETP07949 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RETP07949 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RETP07949 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 CCR12P-201ENST00000446203 998 ntBASIC19.59■□□□□ 0.73
RETP07949 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RETP07949 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.59■□□□□ 0.73
RETP07949 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.59■□□□□ 0.73
RETP07949 AC131212.4-201ENST00000623606 975 ntBASIC19.59■□□□□ 0.73
RETP07949 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
RETP07949 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RETP07949 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RETP07949 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RETP07949 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RETP07949 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RETP07949 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RETP07949 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.58■□□□□ 0.72
RETP07949 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 AC004980.1-204ENST00000429707 299 ntBASIC19.58■□□□□ 0.72
RETP07949 HCG4P8-203ENST00000443049 980 ntBASIC19.58■□□□□ 0.72
RETP07949 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.58■□□□□ 0.72
RETP07949 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.58■□□□□ 0.72
RETP07949 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.58■□□□□ 0.72
RETP07949 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.58■□□□□ 0.72
RETP07949 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.58■□□□□ 0.72
RETP07949 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RETP07949 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RETP07949 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RETP07949 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RETP07949 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 AC121338.2-201ENST00000622535 1744 ntBASIC19.57■□□□□ 0.72
RETP07949 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.57■□□□□ 0.72
RETP07949 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.57■□□□□ 0.72
RETP07949 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RETP07949 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RETP07949 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.57■□□□□ 0.72
RETP07949 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.57■□□□□ 0.72
RETP07949 CLEC4GP1-201ENST00000596555 870 ntBASIC19.57■□□□□ 0.72
RETP07949 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.57■□□□□ 0.72
RETP07949 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.57■□□□□ 0.72
RETP07949 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RETP07949 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RETP07949 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
RETP07949 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.57■□□□□ 0.72
RETP07949 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RETP07949 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms