Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.33■□□□□ 0.68
CAPNS1P04632 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPNS1P04632 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.33■□□□□ 0.68
CAPNS1P04632 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.33■□□□□ 0.68
CAPNS1P04632 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
CAPNS1P04632 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPNS1P04632 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.33■□□□□ 0.68
CAPNS1P04632 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CAPNS1P04632 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.33■□□□□ 0.68
CAPNS1P04632 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPNS1P04632 AL158211.5-201ENST00000623583 2518 ntBASIC19.33■□□□□ 0.68
CAPNS1P04632 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPNS1P04632 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CAPNS1P04632 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CAPNS1P04632 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPNS1P04632 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPNS1P04632 UNC93B2-201ENST00000285383 730 ntBASIC19.32■□□□□ 0.68
CAPNS1P04632 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CAPNS1P04632 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.32■□□□□ 0.68
CAPNS1P04632 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.32■□□□□ 0.68
CAPNS1P04632 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.32■□□□□ 0.68
CAPNS1P04632 NUDT16P1-203ENST00000513809 620 ntBASIC19.32■□□□□ 0.68
CAPNS1P04632 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CAPNS1P04632 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CAPNS1P04632 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CAPNS1P04632 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 KRT16P5-201ENST00000455284 522 ntBASIC19.31■□□□□ 0.68
CAPNS1P04632 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.31■□□□□ 0.68
CAPNS1P04632 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.31■□□□□ 0.68
CAPNS1P04632 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CAPNS1P04632 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CAPNS1P04632 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CAPNS1P04632 AC005332.7-201ENST00000614046 2005 ntBASIC19.3■□□□□ 0.68
CAPNS1P04632 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CAPNS1P04632 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CAPNS1P04632 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPNS1P04632 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CAPNS1P04632 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.3■□□□□ 0.68
CAPNS1P04632 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 MIR1238-201ENST00000408483 83 ntBASIC19.3■□□□□ 0.68
CAPNS1P04632 AL353807.1-201ENST00000427475 662 ntBASIC19.3■□□□□ 0.68
CAPNS1P04632 UPK3BP1-201ENST00000428678 509 ntBASIC19.3■□□□□ 0.68
CAPNS1P04632 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPNS1P04632 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.3■□□□□ 0.68
CAPNS1P04632 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CAPNS1P04632 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPNS1P04632 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPNS1P04632 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.3■□□□□ 0.68
CAPNS1P04632 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CAPNS1P04632 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CAPNS1P04632 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CAPNS1P04632 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CAPNS1P04632 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.29■□□□□ 0.68
CAPNS1P04632 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CAPNS1P04632 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPNS1P04632 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPNS1P04632 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPNS1P04632 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CAPNS1P04632 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms