Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
TCRAP04437 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TCRAP04437 AC007322.4-201ENST00000509611 723 ntBASIC14.79□□□□□ -0.04
TCRAP04437 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRAP04437 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 TEX21P-204ENST00000641479 1693 ntBASIC14.79□□□□□ -0.04
TCRAP04437 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TCRAP04437 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TCRAP04437 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.79□□□□□ -0.04
TCRAP04437 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRAP04437 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRAP04437 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRAP04437 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TCRAP04437 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRAP04437 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRAP04437 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.78□□□□□ -0.04
TCRAP04437 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.78□□□□□ -0.04
TCRAP04437 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRAP04437 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 AC013268.1-206ENST00000638368 961 ntBASIC14.78□□□□□ -0.04
TCRAP04437 AC112229.1-201ENST00000639295 961 ntBASIC14.78□□□□□ -0.04
TCRAP04437 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.78□□□□□ -0.04
TCRAP04437 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
TCRAP04437 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.78□□□□□ -0.04
TCRAP04437 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TCRAP04437 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.77□□□□□ -0.04
TCRAP04437 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.77□□□□□ -0.04
TCRAP04437 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TCRAP04437 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRAP04437 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TCRAP04437 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRAP04437 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRAP04437 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.77□□□□□ -0.04
TCRAP04437 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.77□□□□□ -0.04
TCRAP04437 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TCRAP04437 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TCRAP04437 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TCRAP04437 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.77□□□□□ -0.04
TCRAP04437 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRAP04437 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TCRAP04437 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.77□□□□□ -0.04
TCRAP04437 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRAP04437 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TCRAP04437 AC023632.3-201ENST00000521633 145 ntBASIC14.77□□□□□ -0.05
TCRAP04437 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TCRAP04437 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.77□□□□□ -0.05
TCRAP04437 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TCRAP04437 AL390961.4-201ENST00000623958 2535 ntBASIC14.77□□□□□ -0.05
TCRAP04437 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
TCRAP04437 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRAP04437 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRAP04437 BCL2-203ENST00000589955 5011 ntBASIC14.77□□□□□ -0.05
TCRAP04437 AC135050.7-201ENST00000624508 2218 ntBASIC14.77□□□□□ -0.05
TCRAP04437 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.77□□□□□ -0.05
TCRAP04437 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TCRAP04437 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
TCRAP04437 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.77□□□□□ -0.05
TCRAP04437 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TCRAP04437 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRAP04437 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.76□□□□□ -0.05
TCRAP04437 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRAP04437 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TCRAP04437 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms