Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV3P03979 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRGV3P03979 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV3P03979 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV3P03979 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV3P03979 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV3P03979 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRGV3P03979 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV3P03979 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV3P03979 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV3P03979 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV3P03979 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV3P03979 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
TRGV3P03979 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV3P03979 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV3P03979 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV3P03979 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.28■□□□□ 0.04
TRGV3P03979 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 AL158047.1-201ENST00000445918 881 ntBASIC15.28■□□□□ 0.04
TRGV3P03979 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.28■□□□□ 0.04
TRGV3P03979 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.28■□□□□ 0.04
TRGV3P03979 AC110285.5-201ENST00000611501 352 ntBASIC15.28■□□□□ 0.04
TRGV3P03979 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV3P03979 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV3P03979 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV3P03979 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRGV3P03979 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV3P03979 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.27■□□□□ 0.04
TRGV3P03979 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.27■□□□□ 0.04
TRGV3P03979 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV3P03979 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRGV3P03979 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRGV3P03979 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.27■□□□□ 0.04
TRGV3P03979 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TRGV3P03979 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV3P03979 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV3P03979 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV3P03979 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRGV3P03979 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.27■□□□□ 0.04
TRGV3P03979 AL359736.2-201ENST00000621992 437 ntBASIC15.27■□□□□ 0.04
TRGV3P03979 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.27■□□□□ 0.04
TRGV3P03979 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV3P03979 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
TRGV3P03979 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV3P03979 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
TRGV3P03979 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.27■□□□□ 0.03
TRGV3P03979 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV3P03979 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV3P03979 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRGV3P03979 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRGV3P03979 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TRGV3P03979 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV3P03979 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV3P03979 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRGV3P03979 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV3P03979 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRGV3P03979 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV3P03979 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV3P03979 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV3P03979 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV3P03979 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRGV3P03979 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV3P03979 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV3P03979 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV3P03979 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.26■□□□□ 0.03
TRGV3P03979 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRGV3P03979 AC133681.1-201ENST00000465482 601 ntBASIC15.26■□□□□ 0.03
TRGV3P03979 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.26■□□□□ 0.03
TRGV3P03979 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.26■□□□□ 0.03
TRGV3P03979 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms